If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 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'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ), 'gf_id' => 'HOM05D000566', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000566' ), 'data_identifier' => 'HOM05D000566', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000566', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '979', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p10580' => 'bna', 'A02p32340' => 'bna', 'A03p51420' => 'bna', 'A05p19150' => 'bna', 'A06p04560' => 'bna', 'A06p42600' => 'bna', 'A07p11000' => 'bna', 'A08p02390' => 'bna', 'A08p13870' => 'bna', 'A08p35780' => 'bna', 'Aa31LG10G2790' => 'aar', 'Aa31LG10G5480' => 'aar', 'Aa31LG1G6360' => 'aar', 'Aa31LG2G6620' => 'aar', 'Aa31LG6G11510' => 'aar', 'Aa31LG6G1300' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.3192' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1642' => 'aag', 'Actinidia04427' => 'ach', 'Actinidia14844' => 'ach', 'Actinidia16610' => 'ach', 'Actinidia16611' => 'ach', 'Actinidia16807' => 'ach', 'Actinidia16809' => 'ach', 'Actinidia21725' => 'ach', 'Actinidia23220' => 'ach', 'Actinidia32114' => 'ach', 'Actinidia32632' => 'ach', 'Actinidia35568' => 'ach', 'Ah.01g002380' => 'amhyb', 'Ah.01g005910' => 'amhyb', 'Ah.09g233690' => 'amhyb', 'Ah.09g233700' => 'amhyb', 'Ah.14g086020' => 'amhyb', 'Ah.14g087210' => 'amhyb', 'AL1G17240' => 'aly', 'AL1G42750' => 'aly', 'AL1G54880' => 'aly', 'AL1G60170' => 'aly', 'AL5G14230' => 'aly', 'AL7G35710' => 'aly', 'Aqoxy1G03201' => 'aox', 'Aqoxy2G02496' => 'aox', 'Aqoxy3G03895' => 'aox', 'Aqoxy4G00057' => 'aox', 'Aqoxy4G00467' => 'aox', 'Aqoxy4G02459' => 'aox', 'Aqoxy7G03953' => 'aox', 'arahy.Tifrunner.gnm1.ann1.274M2K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441UHN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.561HRF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57MKXC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5SIA8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.601MBY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.83566S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AZL87G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BA5IRE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KH2PLH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KR3NZ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LT4L2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MEA9HI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MK6WNS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCR4KV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P4R1Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P99IEH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PV2LDA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QI2A5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UYG9TZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V5X3SM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W6Y8Y3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1MR5G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XU6ZBK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YI8MDQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YM045A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YPAX92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z18461' => 'arhy', 'AT1G07120' => 'ath', 'AT1G29040' => 'ath', 'AT1G48280' => 'ath', 'AT1G52080' => 'ath', 'AT3G25690' => 'ath', 'AT4G18570' => 'ath', 'ATR0026G023' => 'atr', 'ATR0053G016' => 'atr', 'ATR0165G016' => 'atr', 'ATR0428G001' => 'atr', 'ATR0602G168' => 'atr', 'ATR0602G291' => 'atr', 'ATR0665G446' => 'atr', 'ATR0796G104' => 'atr', 'Atru.chr1.3559' => 'acertr', 'Atru.chr1.3560' => 'acertr', 'Atru.chr1.3561' => 'acertr', 'Atru.chr10.1700' => 'acertr', 'Atru.chr10.1701' => 'acertr', 'Atru.chr10.675' => 'acertr', 'Atru.chr11.1373' => 'acertr', 'Atru.chr3.4169' => 'acertr', 'Atru.chr4.3176' => 'acertr', 'Atru.chr9.740' => 'acertr', 'AUR62022243' => 'cqu', 'AUR62025048' => 'cqu', 'AUR62031165' => 'cqu', 'AUR62031167' => 'cqu', 'AUR62031956' => 'cqu', 'AUR62034032' => 'cqu', 'AUR62036291' => 'cqu', 'AUR62036579' => 'cqu', 'AUR62036584' => 'cqu', 'AUR62039739' => 'cqu', 'AUR62041219' => 'cqu', 'BcaB03g13406' => 'bca', 'BcaB03g13911' => 'bca', 'BcaB03g14205' => 'bca', 'BcaB03g14207' => 'bca', 'BcaB03g14208' => 'bca', 'BcaB03g16242' => 'bca', 'BcaB04g17172' => 'bca', 'BcaB04g18482' => 'bca', 'BcaB05g25260' => 'bca', 'BcaB07g33771' => 'bca', 'BcaC01g00548' => 'bca', 'BcaC01g01303' => 'bca', 'BcaC06g31124' => 'bca', 'BcaC06g33969' => 'bca', 'BcaC06g35392' => 'bca', 'BcaC08g43025' => 'bca', 'BcaC08g43967' => 'bca', 'BcaC09g51488' => 'bca', 'BcaNung03816' => 'bca', 'BolC1t01226H' => 'bol', 'BolC3t20398H' => 'bol', 'BolC3t21364H' => 'bol', 'BolC6t35407H' => 'bol', 'BolC6t36537H' => 'bol', 'BolC6t40138H' => 'bol', 'BolC7t42164H' => 'bol', 'BolC7t43987H' => 'bol', 'BolC7t45486H' => 'bol', 'BolC8t47078H' => 'bol', 'BolC8t47087H' => 'bol', 'BraA01t01004Z' => 'bra', 'BraA02t08251Z' => 'bra', 'BraA03t14226Z' => 'bra', 'BraA05t20818Z' => 'bra', 'BraA06t23660Z' => 'bra', 'BraA06t27175Z' => 'bra', 'BraA07t28892Z' => 'bra', 'BraA08t32282Z' => 'bra', 'BraA08t33372Z' => 'bra', 'BraA08t35485Z' => 'bra', 'C01p12520' => 'bna', 'C03p81330' => 'bna', 'C03p90410' => 'bna', 'C06p02780' => 'bna', 'C06p13670' => 'bna', 'C07p16640' => 'bna', 'C07p34550' => 'bna', 'C07p49840' => 'bna', 'C08p02830' => 'bna', 'C08p02910' => 'bna', 'CAN.G1143.26' => 'can', 'CAN.G184.78' => 'can', 'CAN.G337.143' => 'can', 'CAN.G635.39' => 'can', 'CAN.G675.27' => 'can', 'CAN.G702.19' => 'can', 'CANSAT35G0195' => 'cansat', 'CANSAT35G0892' => 'cansat', 'CANSAT35G1676' => 'cansat', 'CANSAT54G0935' => 'cansat', 'CANSAT56G2153' => 'cansat', 'CANSAT64G1342' => 'cansat', 'CANSAT78G1501' => 'cansat', 'CARHR006810' => 'chi', 'CARHR028250' => 'chi', 'CARHR037900' => 'chi', 'CARHR042240' => 'chi', 'CARHR225410' => 'chi', 'CARHR288550' => 'chi', 'Carub.0001s0640' => 'cru', 'Carub.0001s2723' => 'cru', 'Carub.0001s3742' => 'cru', 'Carub.0001s4099' => 'cru', 'Carub.0005s0351' => 'cru', 'Carub.0007s2267' => 'cru', 'Ca_01174_v3' => 'car', 'Ca_10522_v3' => 'car', 'Ca_13167_v3' => 'car', 'Ca_21369_v3' => 'car', 'Ca_23280_v3' => 'car', 'Ca_26052_v3' => 'car', 'Ca_26053_v3' => 'car', 'Ca_26577_v3' => 'car', 'CBR_g17138' => 'cbr', 'CBR_g4598' => 'cbr', 'Cc01_g14490' => 'ccan', 'Cc01_g14500' => 'ccan', 'Cc02_g14630' => 'ccan', 'Cc02_g14640' => 'ccan', 'Cc04_g02420' => 'ccan', 'Cc04_g07590' => 'ccan', 'Cc09_g03890' => 'ccan', 'Cc11_g10710' => 'ccan', 'CDE01G0441' => 'cde', 'CDE02G2902' => 'cde', 'CDE02G4350' => 'cde', 'CDE04G1197' => 'cde', 'CDE04G1521' => 'cde', 'CDE04G1590' => 'cde', 'CDE06G1661' => 'cde', 'CDE06G1830' => 'cde', 'CDE08G0428' => 'cde', 'CDE09G0256' => 'cde', 'CDE09G1402' => 'cde', 'CDE12G0702' => 'cde', 'Cfa000590' => 'cfa', 'Cfa000591' => 'cfa', 'Cfa000765' => 'cfa', 'Cfa003628' => 'cfa', 'Cfa003630' => 'cfa', 'Cfa011729' => 'cfa', 'Cfa015739' => 'cfa', 'Cfa018643' => 'cfa', 'Ciclev10004653m.g' => 'ccl', 'Ciclev10014330m.g' => 'ccl', 'Ciclev10014629m.g' => 'ccl', 'Ciclev10016472m.g' => 'ccl', 'Ciclev10025160m.g' => 'ccl', 'Ciclev10028548m.g' => 'ccl', 'Ciclev10030626m.g' => 'ccl', 'CiPaw.01G128100' => 'cil', 'CiPaw.01G229800' => 'cil', 'CiPaw.09G068200' => 'cil', 'CiPaw.09G068300' => 'cil', 'CiPaw.09G148200' => 'cil', 'CiPaw.09G183000' => 'cil', 'CiPaw.10G057700' => 'cil', 'CiPaw.12G003000' => 'cil', 'CiPaw.13G074500' => 'cil', 'CiPaw.14G057200' => 'cil', 'CiPaw.15G125500' => 'cil', 'CiPaw.16G002400' => 'cil', 'ClCG01G005740' => 'cla', 'ClCG01G023640' => 'cla', 'ClCG01G023650' => 'cla', 'ClCG01G025390' => 'cla', 'ClCG03G000560' => 'cla', 'ClCG05G006900' => 'cla', 'ClCG05G023080' => 'cla', 'ClCG09G000280' => 'cla', 'COL.COLO4_07858' => 'col', 'COL.COLO4_11093' => 'col', 'COL.COLO4_22697' => 'col', 'COL.COLO4_26889' => 'col', 'COL.COLO4_31322' => 'col', 'COL.COLO4_34507' => 'col', 'Cpa.g.c29023.1' => 'cpa', 'Cpa.g.sc1.227' => 'cpa', 'Cpa.g.sc13.64' => 'cpa', 'Cpa.g.sc146.14' => 'cpa', 'Cpa.g.sc2.429' => 'cpa', 'Cpa.g.sc285.8' => 'cpa', 'Cpa.g.sc3163.1' => 'cpa', 'Cpa.g.sc7.61' => 'cpa', 'Cpa.g.sc7.62' => 'cpa', 'Cpa.g.sc7.63' => 'cpa', 'CsaV3_1G036390' => 'csa', 'CsaV3_3G015570' => 'csa', 'CsaV3_5G028950' => 'csa', 'CsaV3_5G033910' => 'csa', 'CsaV3_6G050790' => 'csa', 'CsaV3_6G050800' => 'csa', 'CsaV3_6G052640' => 'csa', 'CsaV3_7G035220' => 'csa', 'CSS0004558' => 'camsi', 'CSS0007668' => 'camsi', 'CSS0011575' => 'camsi', 'CSS0020746' => 'camsi', 'CSS0023752' => 'camsi', 'CSS0029795' => 'camsi', 'CSS0031409' => 'camsi', 'CSS0032822' => 'camsi', 'CSS0033217' => 'camsi', 'CSS0041105' => 'camsi', 'CSS0042841' => 'camsi', 'CSS0045532' => 'camsi', 'CSS0045665' => 'camsi', 'DCAR_003151' => 'dca', 'DCAR_004017' => 'dca', 'DCAR_005237' => 'dca', 'DCAR_007360' => 'dca', 'DCAR_007592' => 'dca', 'DCAR_007963' => 'dca', 'DCAR_011341' => 'dca', 'DCAR_023417' => 'dca', 'DCAR_023691' => 'dca', 'DCAR_028012' => 'dca', 'DCAR_031851' => 'dca', 'Dinv04627' => 'din', 'Dinv04628' => 'din', 'Dinv04629' => 'din', 'Dinv09642' => 'din', 'Dinv16515' => 'din', 'Dinv22673' => 'din', 'Dinv22674' => 'din', 'Dinv29496' => 'din', 'Dinv30423' => 'din', 'Dinv37962' => 'din', 'Dinv38594' => 'din', 'Dinv44220' => 'din', 'Dinv44221' => 'din', 'Duzib068G0448' => 'dzi', 'Duzib068G0702' => 'dzi', 'Duzib160G0562' => 'dzi', 'Duzib160G0685' => 'dzi', 'Duzib170G0424' => 'dzi', 'Duzib192G0109' => 'dzi', 'Duzib192G0190' => 'dzi', 'Duzib205G1730' => 'dzi', 'Duzib212G0502' => 'dzi', 'Duzib235G0481' => 'dzi', 'Duzib235G0860' => 'dzi', 'Duzib235G1311' => 'dzi', 'Duzib251G0123' => 'dzi', 'ECA232G4328' => 'eca', 'ECA233G4730' => 'eca', 'ECA234G0195' => 'eca', 'ECA236G3728' => 'eca', 'ECA247G0904' => 'eca', 'ECA248G2713' => 'eca', 'EL10Ac5g11774' => 'bvu', 'EL10Ac8g20506' => 'bvu', 'EL10Ac8g20507' => 'bvu', 'EL10Ac9g21179' => 'bvu', 'EL10Ac9g22388' => 'bvu', 'Eucgr.B03060' => 'egr', 'Eucgr.C01652' => 'egr', 'Eucgr.D01021' => 'egr', 'Eucgr.E02711' => 'egr', 'Eucgr.E02712' => 'egr', 'Eucgr.F03088' => 'egr', 'Eucgr.H04130' => 'egr', 'Eucgr.J01897' => 'egr', 'FAN02G0749' => 'fan', 'FAN05G2580' => 'fan', 'FAN05G4273' => 'fan', 'FAN07G0490' => 'fan', 'FAN08G3571' => 'fan', 'FAN09G1216' => 'fan', 'FAN11G0085' => 'fan', 'FAN11G2369' => 'fan', 'FAN11G2435' => 'fan', 'FAN11G2813' => 'fan', 'FAN12G0120' => 'fan', 'FAN12G3707' => 'fan', 'FAN13G0673' => 'fan', 'FAN14G0380' => 'fan', 'FAN16G0419' => 'fan', 'FAN16G1781' => 'fan', 'FAN16G3553' => 'fan', 'FAN17G1282' => 'fan', 'FAN17G2666' => 'fan', 'FAN18G2832' => 'fan', 'FAN18G3110' => 'fan', 'FAN21G0071' => 'fan', 'FAN21G0306' => 'fan', 'FAN21G0757' => 'fan', 'FAN21G0996' => 'fan', 'FAN22G1085' => 'fan', 'FAN23G2359' => 'fan', 'FAN25G1525' => 'fan', 'FAN25G1547' => 'fan', 'FAN25G2380' => 'fan', 'FvH4_3g07991' => 'fve', 'FvH4_3g08000' => 'fve', 'FvH4_3g11100' => 'fve', 'FvH4_3g39070' => 'fve', 'FvH4_4g21640' => 'fve', 'FvH4_4g28201' => 'fve', 'FvH4_5g12771' => 'fve', 'FvH4_6g32630' => 'fve', 'Glyma.01G089300' => 'gma', 'Glyma.02G101100' => 'gma', 'Glyma.02G228600' => 'gma', 'Glyma.04G136400' => 'gma', 'Glyma.04G136500' => 'gma', 'Glyma.06G209800' => 'gma', 'Glyma.07G205100' => 'gma', 'Glyma.08G199600' => 'gma', 'Glyma.09G079600' => 'gma', 'Glyma.11G169800' => 'gma', 'Glyma.11G171900' => 'gma', 'Glyma.13G118400' => 'gma', 'Glyma.13G170900' => 'gma', 'Glyma.13G171000' => 'gma', 'Glyma.13G171100' => 'gma', 'Glyma.13G231000' => 'gma', 'Glyma.13G353200' => 'gma', 'Glyma.14G094500' => 'gma', 'Glyma.14G195600' => 'gma', 'Glyma.15G021100' => 'gma', 'Glyma.15G081500' => 'gma', 'Glyma.15G186500' => 'gma', 'Glyma.17G041500' => 'gma', 'Glyma.17G229000' => 'gma', 'Glyma.18G060701' => 'gma', 'Glyma.20G185300' => 'gma', 'Gohir.A02G059100' => 'ghi', 'Gohir.A02G116601' => 'ghi', 'Gohir.A03G028600' => 'ghi', 'Gohir.A05G132600' => 'ghi', 'Gohir.A06G118200' => 'ghi', 'Gohir.A06G125600' => 'ghi', 'Gohir.A06G134006' => 'ghi', 'Gohir.A06G190000' => 'ghi', 'Gohir.A07G038850' => 'ghi', 'Gohir.A09G074100' => 'ghi', 'Gohir.A10G005750' => 'ghi', 'Gohir.A10G031200' => 'ghi', 'Gohir.A12G171900' => 'ghi', 'Gohir.D02G064800' => 'ghi', 'Gohir.D03G049800' => 'ghi', 'Gohir.D03G057500' => 'ghi', 'Gohir.D03G140001' => 'ghi', 'Gohir.D05G134500' => 'ghi', 'Gohir.D06G122000' => 'ghi', 'Gohir.D06G136000' => 'ghi', 'Gohir.D06G136400' => 'ghi', 'Gohir.D06G198400' => 'ghi', 'Gohir.D07G043000' => 'ghi', 'Gohir.D09G073800' => 'ghi', 'Gohir.D10G005733' => 'ghi', 'Gohir.D10G032000' => 'ghi', 'Gohir.D10G208750' => 'ghi', 'Gohir.D12G148850' => 'ghi', 'Gohir.D12G174300' => 'ghi', 'Gorai.001G046000' => 'gra', 'Gorai.003G051300' => 'gra', 'Gorai.003G061000' => 'gra', 'Gorai.003G146800' => 'gra', 'Gorai.005G073400' => 'gra', 'Gorai.006G088700' => 'gra', 'Gorai.007G180700' => 'gra', 'Gorai.008G160200' => 'gra', 'Gorai.008G187000' => 'gra', 'Gorai.009G138100' => 'gra', 'Gorai.010G142200' => 'gra', 'Gorai.010G158300' => 'gra', 'Gorai.010G158600' => 'gra', 'Gorai.010G231300' => 'gra', 'Gorai.011G006400' => 'gra', 'Gorai.011G033700' => 'gra', 'Gorai.011G234800' => 'gra', 'GSVIVG01008227001' => 'vvi', 'GSVIVG01011966001' => 'vvi', 'GSVIVG01016952001' => 'vvi', 'GSVIVG01017698001' => 'vvi', 'GSVIVG01021189001' => 'vvi', 'GSVIVG01021190001' => 'vvi', 'GSVIVG01021753001' => 'vvi', 'GSVIVG01024701001' => 'vvi', 'HanXRQChr01g0005491' => 'han', 'HanXRQChr02g0032071' => 'han', 'HanXRQChr04g0128661' => 'han', 'HanXRQChr05g0142801' => 'han', 'HanXRQChr07g0186921' => 'han', 'HanXRQChr07g0186931' => 'han', 'HanXRQChr09g0276091' => 'han', 'HanXRQChr11g0326151' => 'han', 'HanXRQChr11g0340911' => 'han', 'HanXRQChr12g0365341' => 'han', 'HanXRQChr15g0490581' => 'han', 'HanXRQChr16g0507591' => 'han', 'Haze_00757' => 'cav', 'Haze_05953' => 'cav', 'Haze_06259' => 'cav', 'Haze_06260' => 'cav', 'Haze_15871' => 'cav', 'Haze_15875' => 'cav', 'Haze_17426' => 'cav', 'Haze_24367' => 'cav', 'Hma1.2p1_0155F.1_g068260' => 'hma', 'Hma1.2p1_0340F.1_g129960' => 'hma', 'Hma1.2p1_0406F.1_g145970' => 'hma', 'Hma1.2p1_0430F.1_g151220' => 'hma', 'Hma1.2p1_0437F.1_g152980' => 'hma', 'Hma1.2p1_1067F.1_g253790' => 'hma', 'Hma1.2p1_1187F.1_g265170' => 'hma', 'Hma1.2p1_1621F.1_g294040' => 'hma', 'HPP92_003959' => 'vpl', 'HPP92_003960' => 'vpl', 'HPP92_003961' => 'vpl', 'HPP92_003963' => 'vpl', 'HPP92_004045' => 'vpl', 'HPP92_005918' => 'vpl', 'HPP92_005919' => 'vpl', 'HPP92_005927' => 'vpl', 'HPP92_012766' => 'vpl', 'HPP92_012767' => 'vpl', 'HPP92_018285' => 'vpl', 'HPP92_021355' => 'vpl', 'HPP92_024031' => 'vpl', 'HPP92_024032' => 'vpl', 'HPP92_024140' => 'vpl', 'Hund00707' => 'sun', 'Hund05772' => 'sun', 'Hund17671' => 'sun', 'Hund21185' => 'sun', 'Hund23959' => 'sun', 'Hund23960' => 'sun', 'Lalb_Chr02g0151811' => 'lal', 'Lalb_Chr04g0252141' => 'lal', 'Lalb_Chr04g0254981' => 'lal', 'Lalb_Chr04g0263011' => 'lal', 'Lalb_Chr05g0218761' => 'lal', 'Lalb_Chr05g0218771' => 'lal', 'Lalb_Chr11g0069121' => 'lal', 'Lalb_Chr12g0200541' => 'lal', 'Lalb_Chr13g0299001' => 'lal', 'Lalb_Chr16g0384241' => 'lal', 'Lalb_Chr16g0384251' => 'lal', 'Lalb_Chr18g0058361' => 'lal', 'Lalb_Chr20g0121251' => 'lal', 'Lalb_Chr22g0351621' => 'lal', 'Lj1A1157T78' => 'lonja', 'Lj1A1194T86' => 'lonja', 'Lj2A1086T62' => 'lonja', 'Lj2A297T108' => 'lonja', 'Lj2C297T7' => 'lonja', 'Lj2g0021669' => 'lja', 'Lj3A1020T61' => 'lonja', 'Lj3g0001040' => 'lja', 'Lj3g0017823' => 'lja', 'Lj3g0025101' => 'lja', 'Lj4A776T58' => 'lonja', 'Lj4g0010703' => 'lja', 'Lj4g0012403' => 'lja', 'Lj4g0018718' => 'lja', 'Lj5A51G50' => 'lonja', 'Lj5g0003034' => 'lja', 'Lj5g0018501' => 'lja', 'Lj6A703T90' => 'lonja', 'Lj6A767T64' => 'lonja', 'Lj6g0010625' => 'lja', 'Lj6g0022999' => 'lja', 'Lj9A515T34' => 'lonja', 'LjContig00141g0025164' => 'lja', 'Lsat_1_v5_gn_1_36681' => 'lsa', 'Lsat_1_v5_gn_1_90920' => 'lsa', 'Lsat_1_v5_gn_2_58320' => 'lsa', 'Lsat_1_v5_gn_4_50000' => 'lsa', 'Lsat_1_v5_gn_4_50020' => 'lsa', 'Lsat_1_v5_gn_4_96600' => 'lsa', 'Lsat_1_v5_gn_7_31860' => 'lsa', 'Lsat_1_v5_gn_7_85001' => 'lsa', 'Lsat_1_v5_gn_8_37441' => 'lsa', 'Lsat_1_v5_gn_9_98140' => 'lsa', 'Manes.03G212600' => 'mes', 'Manes.04G135700' => 'mes', 'Manes.05G118300' => 'mes', 'Manes.06G073200' => 'mes', 'Manes.11G031400' => 'mes', 'Manes.14G126600' => 'mes', 'Manes.16G037100' => 'mes', 'Manes.16G037200' => 'mes', 'Manes.17G054000' => 'mes', 'Manes.18G144100' => 'mes', 'Mapoly0074s0042' => 'mpo', 'MBI01_g01247_MAGBIO' => 'mbi', 'MBI02_g31778_MAGBIO' => 'mbi', 'MBI02_g38472_MAGBIO' => 'mbi', 'MBI04_g22191_MAGBIO' => 'mbi', 'MBI06_g18003_MAGBIO' => 'mbi', 'MBI06_g18004_MAGBIO' => 'mbi', 'MBI06_g25984_MAGBIO' => 'mbi', 'MBI06_g25985_MAGBIO' => 'mbi', 'MBI06_g45389_MAGBIO' => 'mbi', 'MBI07_g21407_MAGBIO' => 'mbi', 'MBI10_g08550_MAGBIO' => 'mbi', 'MBI15_g21755_MAGBIO' => 'mbi', 'MBI15_g32967_MAGBIO' => 'mbi', 'MBI16_g33827_MAGBIO' => 'mbi', 'MBI16_g33828_MAGBIO' => 'mbi', 'MBI16_g46923_MAGBIO' => 'mbi', 'MBI16_g46924_MAGBIO' => 'mbi', 'MBI18_g10376_MAGBIO' => 'mbi', 'MBI19_g30283_MAGBIO' => 'mbi', 'MCO02G300' => 'mco', 'MCO11G016' => 'mco', 'MD03G1065000' => 'mdo', 'MD05G1264200' => 'mdo', 'MD05G1303500' => 'mdo', 'MD06G1210200' => 'mdo', 'MD09G1199900' => 'mdo', 'MD10G1242300' => 'mdo', 'MD10G1242400' => 'mdo', 'MD10G1282600' => 'mdo', 'MD10G1282700' => 'mdo', 'MD11G1069000' => 'mdo', 'MD13G1047800' => 'mdo', 'MD13G1138500' => 'mdo', 'MD16G1049300' => 'mdo', 'MD16G1049500' => 'mdo', 'MD16G1134400' => 'mdo', 'Medtr0170s0030' => 'mtr', 'Medtr1g016290' => 'mtr', 'Medtr1g093850' => 'mtr', 'Medtr2g100630' => 'mtr', 'Medtr4g087740' => 'mtr', 'Medtr4g087750' => 'mtr', 'Medtr4g087780' => 'mtr', 'Medtr4g124070' => 'mtr', 'Medtr5g053270' => 'mtr', 'Medtr5g071817' => 'mtr', 'Medtr5g071840' => 'mtr', 'Medtr7g101060' => 'mtr', 'Medtr8g014900' => 'mtr', 'MELO3C005356.2' => 'cme', 'MELO3C006756.2' => 'cme', 'MELO3C007044.2' => 'cme', 'MELO3C007220.2' => 'cme', 'MELO3C007221.2' => 'cme', 'MELO3C012209.2' => 'cme', 'MELO3C020530.2' => 'cme', 'MELO3C024431.2' => 'cme', 'Migut.D00985' => 'egut', 'Migut.H01453' => 'egut', 'Migut.I00964' => 'egut', 'Migut.L01102' => 'egut', 'Migut.M01050' => 'egut', 'Migut.M01051' => 'egut', 'Migut.M01944' => 'egut', 'MSTRG.11016' => 'ama', 'MSTRG.13214' => 'ama', 'MSTRG.14725' => 'ama', 'MSTRG.22623' => 'ama', 'MSTRG.4756' => 'ama', 'MSTRG.7395' => 'ama', 'MSTRG.7396' => 'ama', 'Nitab4.5_0000206g0050' => 'nta', 'Nitab4.5_0000300g0150' => 'nta', 'Nitab4.5_0000681g0010' => 'nta', 'Nitab4.5_0001219g0080' => 'nta', 'Nitab4.5_0001608g0010' => 'nta', 'Nitab4.5_0001991g0050' => 'nta', 'Nitab4.5_0003489g0020' => 'nta', 'Nitab4.5_0004705g0020' => 'nta', 'Nitab4.5_0005085g0060' => 'nta', 'Nitab4.5_0005803g0040' => 'nta', 'Nitab4.5_0010317g0010' => 'nta', 'Nitab4.5_0011721g0020' => 'nta', 'Nn1g04373' => 'nnu', 'Nn1g09060' => 'nnu', 'Nn2g10924' => 'nnu', 'Nn3g17695' => 'nnu', 'Nn3g21940' => 'nnu', 'Nn4g23702' => 'nnu', 'Nn4g23703' => 'nnu', 'Nn4g25354' => 'nnu', 'Nn6g35362' => 'nnu', 'Nn7g37789' => 'nnu', 'Nn8g39005' => 'nnu', 'Oeu012061.1' => 'oeu', 'Oeu024101.1' => 'oeu', 'Oeu026720.1' => 'oeu', 'Oeu039926.1' => 'oeu', 'Oeu041793.1' => 'oeu', 'Oeu043097.1' => 'oeu', 'Oeu044620.1' => 'oeu', 'Oeu048200.1' => 'oeu', 'Oeu052698.1' => 'oeu', 'Oeu052830.1' => 'oeu', 'Oeu062344.1' => 'oeu', 'Os01g0580800' => 'osa', 'Os01g0613300' => 'osa', 'Os01g0651932' => 'osa', 'Os01g0652000' => 'osa', 'Os03g0294100' => 'osa', 'Os05g0185800' => 'osa', 'Os05g0573900' => 'osa', 'Os08g0129600' => 'osa', 'Os11g0105750' => 'osa', 'Os12g0105300' => 'osa', 'Peaxi162Scf00038g01130' => 'pax', 'Peaxi162Scf00195g00411' => 'pax', 'Peaxi162Scf00207g01129' => 'pax', 'Peaxi162Scf00223g00811' => 'pax', 'Peaxi162Scf00367g00736' => 'pax', 'Peaxi162Scf01070g00226' => 'pax', 'Peaxi162Scf01479g00012' => 'pax', 'PGR004G0120' => 'pgr', 'PGR042G0221' => 'pgr', 'PGR042G3563' => 'pgr', 'PGR083G0327' => 'pgr', 'PGR083G0569' => 'pgr', 'PGR102G0482' => 'pgr', 'PGR119G0876' => 'pgr', 'PGR119G2528' => 'pgr', 'PGSC0003DMG400000805' => 'stu', 'PGSC0003DMG400010246' => 'stu', 'PGSC0003DMG400016519' => 'stu', 'PGSC0003DMG400021139' => 'stu', 'PGSC0003DMG401002606' => 'stu', 'PGSC0003DMG401022314' => 'stu', 'Phvul.001G035200' => 'pvu', 'Phvul.003G026100' => 'pvu', 'Phvul.003G058200' => 'pvu', 'Phvul.003G058300' => 'pvu', 'Phvul.003G122900' => 'pvu', 'Phvul.005G164900' => 'pvu', 'Phvul.006G177200' => 'pvu', 'Phvul.007G101700' => 'pvu', 'Phvul.008G259500' => 'pvu', 'Phvul.009G200900' => 'pvu', 'Phvul.009G220500' => 'pvu', 'Phvul.010G143700' => 'pvu', 'Potri.001G191300' => 'ptr', 'Potri.001G279000' => 'ptr', 'Potri.001G460300' => 'ptr', 'Potri.003G047200' => 'ptr', 'Potri.004G054900' => 'ptr', 'Potri.009G073600' => 'ptr', 'Potri.010G003100' => 'ptr', 'Potri.010G130800' => 'ptr', 'Potri.011G064500' => 'ptr', 'Potri.011G064600' => 'ptr', 'Potri.011G156500' => 'ptr', 'Pp3c15_19960' => 'ppa', 'Pp3c23_18520' => 'ppa', 'Pp3c24_14610' => 'ppa', 'Pp3c6_26200' => 'ppa', 'Pp3c7_17580' => 'ppa', 'PRCOL_00004523' => 'pco', 'Prupe.1G103700' => 'ppe', 'Prupe.1G304200' => 'ppe', 'Prupe.3G056400' => 'ppe', 'Prupe.4G059200' => 'ppe', 'Prupe.4G059300' => 'ppe', 'Prupe.4G101400' => 'ppe', 'Prupe.5G216400' => 'ppe', 'Prupe.6G053900' => 'ppe', 'Psat0s1206g0120' => 'psa', 'Psat0s629g0240' => 'psa', 'Psat2g056000' => 'psa', 'Psat4g196760' => 'psa', 'Psat5g295080' => 'psa', 'Psat5g295160' => 'psa', 'Psat6g020520' => 'psa', 'Psat6g181200' => 'psa', 'Psat7g118840' => 'psa', 'Psat7g118880' => 'psa', 'PSO017G4102' => 'pso', 'PSO063G1141' => 'pso', 'PSO063G3138' => 'pso', 'PSO170G4050' => 'pso', 'PSO210G1378' => 'pso', 'PSO210G4292' => 'pso', 'PSO210G6284' => 'pso', 'PSO339G6417' => 'pso', 'PSO384G0660' => 'pso', 'PSO478G1853' => 'pso', 'PSO541G3700' => 'pso', 'PSO675G0126' => 'pso', 'PSO675G8230' => 'pso', 'PSO675G8854' => 'pso', 'PSO761G0458' => 'pso', 'PSO782G1797' => 'pso', 'PSO832G0997' => 'pso', 'QL01p001020' => 'qlo', 'QL01p004163' => 'qlo', 'QL01p039102' => 'qlo', 'QL02p056177' => 'qlo', 'QL05p018774' => 'qlo', 'QL05p046274' => 'qlo', 'QL05p046292' => 'qlo', 'QL05p064748' => 'qlo', 'QL06p014478' => 'qlo', 'QL10p023104' => 'qlo', 'RcHm_v2.0_Chr2g0141111' => 'rch', 'RcHm_v2.0_Chr4g0427871' => 'rch', 'RcHm_v2.0_Chr4g0435971' => 'rch', 'RcHm_v2.0_Chr5g0010311' => 'rch', 'RcHm_v2.0_Chr5g0010321' => 'rch', 'RcHm_v2.0_Chr5g0017991' => 'rch', 'RcHm_v2.0_Chr5g0070381' => 'rch', 'RcHm_v2.0_Chr7g0184451' => 'rch', 'Rhsim02G0214200' => 'rsi', 'Rhsim08G0228800' => 'rsi', 'Rhsim09G0113200' => 'rsi', 'Rhsim09G0155600' => 'rsi', 'Rhsim10G0120600' => 'rsi', 'Rhsim13G0067600' => 'rsi', 'Rhsim13G0191700' => 'rsi', 'Sabra01G0150300' => 'sbr', 'Sabra03G0019300' => 'sbr', 'Sabra08G0087300' => 'sbr', 'Sabra09G0055700' => 'sbr', 'Sabra10G0002500' => 'sbr', 'Sabra10G0099700' => 'sbr', 'Sabra11G0046300' => 'sbr', 'Sabra11G0046400' => 'sbr', 'Sabra11G0143400' => 'sbr', 'Sabra16G0172800' => 'sbr', 'Sabra16G0312000' => 'sbr', 'SalBow1G7791' => 'sbo', 'SalBow2G2482' => 'sbo', 'SalBow5G1331' => 'sbo', 'SalBow8G0706' => 'sbo', 'SalBow8G1882' => 'sbo', 'SalBow8G3134' => 'sbo', 'SalBow8G4522' => 'sbo', 'SalBow8G5562' => 'sbo', 'Sc04g0006780' => 'sci', 'Sc05g0007190' => 'sci', 'Sc05g0007200' => 'sci', 'Sc06g0010430' => 'sci', 'Sc12g0010040' => 'sci', 'Sc15g0001720' => 'sci', 'Sc24g0002530' => 'sci', 'Sed0000719' => 'sed', 'Sed0001579' => 'sed', 'Sed0003601' => 'sed', 'Sed0004567' => 'sed', 'Sed0006380' => 'sed', 'Sed0013397' => 'sed', 'Sed0014196' => 'sed', 'Sed0016456' => 'sed', 'Sed0017098' => 'sed', 'Sed0018331' => 'sed', 'Sed0020325' => 'sed', 'Sed0020395' => 'sed', 'Sed0021770' => 'sed', 'Sed0021980' => 'sed', 'SEGI_04801' => 'sgi', 'SEGI_06418' => 'sgi', 'SEGI_10579' => 'sgi', 'SEGI_11508' => 'sgi', 'SEGI_18524' => 'sgi', 'SEGI_24590' => 'sgi', 'SEGI_27627' => 'sgi', 'SEGI_28108' => 'sgi', 'SEGI_34869' => 'sgi', 'SGA_v2.0_scaffold109G31086' => 'sas', 'SGA_v2.0_scaffold16G07880' => 'sas', 'SGA_v2.0_scaffold1G00029' => 'sas', 'SGA_v2.0_scaffold1G00030' => 'sas', 'SGA_v2.0_scaffold223G42890' => 'sas', 'SGA_v2.0_scaffold265G46055' => 'sas', 'SGA_v2.0_scaffold4G02031' => 'sas', 'SHI19533' => 'shi', 'SHI54757' => 'shi', 'SMO347G0187' => 'smo', 'SMO361G0381' => 'smo', 'SMO361G0678' => 'smo', 'Solyc02g069560.3' => 'sly', 'Solyc02g077090.4' => 'sly', 'Solyc03g121140.4' => 'sly', 'Solyc05g009930.3' => 'sly', 'Solyc06g062400.2' => 'sly', 'Solyc07g064690.1' => 'sly', 'Sopen02g018690' => 'spe', 'Sopen02g022020' => 'spe', 'Sopen03g039970' => 'spe', 'Sopen05g005740' => 'spe', 'Sopen06g021880' => 'spe', 'Sopen07g032890' => 'spe', 'Sp1g05870' => 'spa', 'Sp1g24970' => 'spa', 'Sp1g35240' => 'spa', 'Sp1g38660' => 'spa', 'Sp2g14950' => 'spa', 'Sp7g15470' => 'spa', 'TAR365G0476' => 'tar', 'TAR365G1098' => 'tar', 'TAR383G0913' => 'tar', 'TAR622G1185' => 'tar', 'TAR624G0549' => 'tar', 'TAR624G0866' => 'tar', 'TAR626G0104' => 'tar', 'TAR626G0526' => 'tar', 'TAR626G0899' => 'tar', 'TAR626G1026' => 'tar', 'TAR626G1519' => 'tar', 'TAR626G1832' => 'tar', 'TAR629G0177' => 'tar', 'TAR629G1087' => 'tar', 'TAR629G1095' => 'tar', 'TAR629G1141' => 'tar', 'TAR629G2336' => 'tar', 'TAR629G2406' => 'tar', 'TAR633G1772' => 'tar', 'TAR633G2001' => 'tar', 'TAR700G0001' => 'tar', 'THA.LOC104802619' => 'tha', 'THA.LOC104805241' => 'tha', 'THA.LOC104806152' => 'tha', 'THA.LOC104814247' => 'tha', 'THA.LOC104815807' => 'tha', 'THA.LOC104817956' => 'tha', 'THA.LOC104825718' => 'tha', 'Thecc.02G362400' => 'tca', 'Thecc.03G027300' => 'tca', 'Thecc.04G314200' => 'tca', 'Thecc.06G008000' => 'tca', 'Thecc.06G102300' => 'tca', 'Thecc.06G173200' => 'tca', 'Thecc.06G173300' => 'tca', 'Thecc.09G352100' => 'tca', 'Thhalv10003588m.g' => 'esa', 'Thhalv10007909m.g' => 'esa', 'Thhalv10009067m.g' => 'esa', 'Thhalv10011348m.g' => 'esa', 'Thhalv10012201m.g' => 'esa', 'Thhalv10024648m.g' => 'esa', 'TPR.G12637' => 'tpr', 'TPR.G13075' => 'tpr', 'TPR.G15135' => 'tpr', 'TPR.G16257' => 'tpr', 'TPR.G16280' => 'tpr', 'TPR.G24640' => 'tpr', 'TPR.G2702' => 'tpr', 'TPR.G35665' => 'tpr', 'TPR.G5134' => 'tpr', 'TPR.G6520' => 'tpr', 'TPR.G9795' => 'tpr', 'TWI18G1121' => 'twi', 'TWI31G0005' => 'twi', 'TWI38G1373' => 'twi', 'TWI38G1453' => 'twi', 'TWI38G1860' => 'twi', 'TWI38G2220' => 'twi', 'TWI38G2249' => 'twi', 'TWI63G1032' => 'twi', 'TWI79G0728' => 'twi', 'TWI79G1690' => 'twi', 'unitig_0.g710' => 'ugi', 'unitig_22.g6548' => 'ugi', 'unitig_26.g10272' => 'ugi', 'unitig_26.g9352' => 'ugi', 'unitig_61.g26086' => 'ugi', 'unitig_699.g19342' => 'ugi', 'unitig_748.g7447' => 'ugi', 'unitig_748.g8086' => 'ugi', 'unitig_749.g13662' => 'ugi', 'unitig_899.g14771' => 'ugi', 'vmacro02948' => 'vma', 'vmacro03461' => 'vma', 'vmacro03936' => 'vma', 'vmacro03937' => 'vma', 'vmacro10522' => 'vma', 'vmacro11254' => 'vma', 'vmacro18840' => 'vma', 'VMungo0251G1536' => 'vmu', 'VMungo0251G1655' => 'vmu', 'VMungo0251G3123' => 'vmu', 'VMungo0331G1583' => 'vmu', 'VMungo0540G1475' => 'vmu', 'VMungo0647G1778' => 'vmu', 'VMungo0647G1830' => 'vmu', 'VMungo0720G2337' => 'vmu', 'VMungo0720G2798' => 'vmu', 'VMungo1080G1237' => 'vmu', 'VMungo1215G0552' => 'vmu', 'VMungo1215G3397' => 'vmu', 'VMungo1309G1147' => 'vmu', 'VMungo1309G2557' => 'vmu', 'Zm00001eb013540' => 'zma', 'Zm00001eb158220' => 'zma', 'Zm00001eb160390' => 'zma', 'Zm00001eb162000' => 'zma', 'Zm00001eb163080' => 'zma', 'Zm00001eb261720' => 'zma', 'Zm00001eb270720' => 'zma', 'Zm00001eb283600' => 'zma', 'Zm00001eb296520' => 'zma', 'Zm00001eb296680' => 'zma', 'Zm00001eb344430' => 'zma', 'Zm00001eb396920' => 'zma' ) $gf_id = 'HOM05D000566' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000566' ) $data_identifier = 'HOM05D000566' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 6, 'aag' => (int) 2, 'ach' => (int) 11, 'amhyb' => (int) 6, 'aly' => (int) 6, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 6, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 11, 'bca' => (int) 19, 'bol' => (int) 11, 'bra' => (int) 10, 'can' => (int) 6, 'cansat' => (int) 7, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 6, 'cpa' => (int) 10, 'csa' => (int) 8, 'camsi' => (int) 13, 'dca' => (int) 11, 'din' => (int) 13, 'dzi' => (int) 13, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 8, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 26, 'ghi' => (int) 29, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 12, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 15, 'sun' => (int) 6, 'lal' => (int) 14, 'lonja' => (int) 11, 'lja' => (int) 12, 'lsa' => (int) 10, 'mes' => (int) 10, 'mpo' => (int) 1, 'mbi' => (int) 19, 'mco' => (int) 2, 'mdo' => (int) 15, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 7, 'ama' => (int) 7, 'nta' => (int) 12, 'nnu' => (int) 11, 'oeu' => (int) 11, 'osa' => (int) 10, 'pax' => (int) 7, 'pgr' => (int) 8, 'stu' => (int) 6, 'pvu' => (int) 12, 'ptr' => (int) 11, 'ppa' => (int) 5, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 17, 'qlo' => (int) 10, 'rch' => (int) 8, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 8, 'sci' => (int) 7, 'sed' => (int) 14, 'sgi' => (int) 9, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 3, 'sly' => (int) 6, 'spe' => (int) 6, 'spa' => (int) 6, 'tar' => (int) 21, 'tha' => (int) 7, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 11, 'twi' => (int) 10, 'ugi' => (int) 10, 'vma' => (int) 7, 'vmu' => (int) 14, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb396920' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1